In Review/Revision:
  1. Parker, S.W., Moore, J.F., Wilkinson, K.A., Breton, A.R., Carlson, A.K., Hines, J.E., Coleman, T.S., and Pine, W.E. In Revision. Range-wide multistate mark-recapture estimates of survival and movement rates for threatened Gulf Sturgeon. Canadian Journal of Fisheries and Aquatic Sciences.
  2. Moore, J.F., Hostetter, N.J., Pine, W.E., and Royle, J.A. In Revision. Non-random sampling can strongly bias estimates of population growth rate using N-mixture models: guidance for monitoring programs. Wildlife Research.
  3. Moore, J.F., Waddle, H., Johnson, F., Martin, J., Grant, E., Fleming, J., Akre, T.S., Brown, D.J., Lee, Y.M., Drescher-Lehman, J., Kleopfer, J., Meck, J., Oxenrider, K., Tamplin, J., Tur, A., and Wiley, L. In Revision. Quantifying the relative importance of survival threats to a long-lived reptile using expert elicitation. ​Endangered Species Research.
  4. ​Casteel, J.L., Moore, J.F., Fisch, N.C., Richardson, M.S., Ahrens, R.N.M., Camp, E.V., Cahill, C.L., Walters, C.J., and Pine, W.E. In Review. Oyster clutch-recruit patterns provide new insight into the restoration and management of a critical resource. ​Marine and Coastal Fisheries.
  5. Aufmuth, J., Moore, J.F., Pine, W.E., and Ennis. B. In Review. An Oyster's Pearl: Restoring the elevation of Lone Cabbage Reef, Florida. Restoration Ecology.
  6. Gowan, T.A., Moore, J.F., Edwards, H.H., Goode, A.B.C., and Martin, J. In Review. An approach to modelling abundance of marine wildlife over space and time from unstructured aerial surveys. Journal of Wildlife Management.
  7. Everatt, K., Andersen, L., Moore, J.F., Hines, J.E., and Kerley, G.I.H. In Review. The functional effects of African lions on co-occurring carnivores differs across species pairs and with changes in resource availability and lion abundance. Oecologia.
  8. Edwards, H.H., Moore, J.F., Auil-Gomez, N., Galves, J., Valentine, A., Guy, C., Ubeda, A., and Alvarez-Aleman, A. In Review. First abundance estimates for Antillean Manatees (Trichechus manatus manatus) in Belize. Scientific Reports.
  9. Pine, W.E., Moore, J.F., Dodrill, M., Aufmuth, J., Moreno, M., Coleman, T., Castell, J., Beck, S., Ennis, B., Rogers, N., and Frederick, P. Substrate restoration is a partial but not complete solution for long-term declines in oyster populations - a case history from the northeastern Gulf of Mexico. Marine and Coastal Fisheries. 

Published:
  1. Gross, E., Jayasinghe, N., Dahal, S., Tenzin, S., Klenzendorf, S., Vannelli, K., van Gils, E., Hilderink-Koopmans, F., McVey, A., Banasiak, N., Boron, V., Frances, D., Petrone, S., Elliott, W, Cranston, K., Clemens, K., Moore, J.F., Glikman, J., Kansky, R., Marchini, S., Bhatia, S., and Kinnaird, M. 2025. In Press. C2C - Conflict to Coexistence: A global approach to manage human-wildlife conflict for coexistence. Conservation Science and Practice.  doi: 10.1111/csp2.13292.
  2. Kuiper, T., Dancer, A., Beale, C.M., Ghoddousi, A., Ibbett, H., Joanny, L., Keane, A., Kavhu, B., Makaza, D., Milner-Gulland, E.J., Moore, J.F., and Xu, L. 2025. Unlocking the value of ranger-based monitoring for biodiversity conservation and protected area management. Conservation Letters. doi:10.1111/conl.13082.
  3. Muthiuru, A., Muruthi, P., Kimitei, K., and Moore, J.F. 2024. Using irregular ranger patrols to quantify elephant occupancy in non-protected and community modified landscapes. Animal Conservation. doi: 10.111/acv.12963.
  4. Moore, J.F., Estela, N., Toupou, K., Koivogui, S., Camara, A., Diawara, M., and Shirley, M. 2024. Insights into surveying pangolins using ground and arboreal camera traps. Mammalia. 88(2), 65-74.
  5. Clements, H.S., …, Moore, J.F., et al. 2024. The bii4africa dataset of faunal and floral population intactness estimates across Africa's major land uses. Scientific Data. 11:191. doi: 10.1038/s41597-02832-6.
  6. Uzabaho, E., Kwizera, N., Moore, J.F., and Nsabimana, D. 2024. An occupancy analysis of the factors affecting the presence of carnivores at the national park-human community interface in Rwanda. African Journal of Ecology. doi: 10.1111/aje.13238.
  7. Robertson, E.P., Walsh, D.P., Martin, J., Work, T., Kellogg, C., Evans, J., Barker, V., Hawthorne, A., Aeby, G., Paul, V.J., Walker, B., Kiryu, Y., Woodley, C.M., Meyer, J.L., Rosales, S.M., Studivan, M., Moore, J.F., Brandt, M.E., and Bruckner, A. 2023. Rapid prototyping for quantifying belief weights of competing hypotheses about emergent diseases. Journal of Environmental Management. 337(117668). doi: 10.1016/j.jenvman.2023.117668.
  8. Uzabaho, E., Kayijamahe, C., Musana, A., Uwingeli, P., Masaaba, C., Nyiratuza, M., and Moore, J.F. 2022. What factors affect species richness and distribution dynamics within two Afromontane protected areas? Wildlife Research. doi: 10.1071/WR21171.
  9. Fleming, J., Moore, J.F., Waddle, H., Martin, J., and Campbell Grant, E.H. 2022. Population projections for the northern red-bellied cooter (Pseudemys rubriventris). Journal of Herpetology, 56(3): 362-369.
  10. Casteel, J., Moore, J.F., Pine, W.E., and Johnston, G.R. 2022. Analysis of the methods to estimate abundance of River cooters Pseudemys concinna: An example from the Santa Fe River, Florida. Ichthyology & Herpetology. 110(2): 354-363.
  11. Healy, B.D., Moore, J.F., and Pine, W.E. 2022. Monitoring and managing fishes that are invisible and keep moving around: influences of an invasive species and environmental factors on capture probability. North American Journal of Fisheries Management. ​doi: 10.1002/nafm.10755
  12. Moore, J.F., Martin, J., Waddle, H., Grant, E.H.C., Fleming, J., Bohnett, E., Akre, T.S.B., Brown, D.J., Jones, M.T., Meck, J.R., Oxenrider, K., Tur, A., Willey, L.L., and Johnson, F. 2022. Evaluating the effect of expert elicitation techniques on population status assessment in the face of large uncertainty. Journal of Environmental Management. 306 (114453). doi: 10.1016/j.jenvman.2022.114453
  13. Moore, J.F., Soanes, K, Balbuena, D., Beirne, C., Bowler, M., Carrasco-Rueda, F., Cheyne, S., Coutant, O., Forget, P.M., Haysom, J., Houlihan, P., Olson, E., Lindshield, S., Martin, J., Tobler, M., Whitworth, A., and Gregory, T. 2021. The Potential and Practice of Arboreal Camera Trapping. Methods in Ecology and Evolution. 12(10). doi: 10.1111/2041-210X.13666
  14. Moore, J.F., Uzabaho, E., Musana, A., Uwingeli, P., Hines, J.E., and Nichols, J.D. 2021. What is the effect of poaching on wildlife species? Ecological Applications. 31(7). doi: 10.1002/eap.2397.
  15. Moore, J.F., and Pine, W.E. 2021. Bootstrap methods can help evaluate monitoring program performance to inform restoration as part of an adaptive management program. PeerJ. 9:e11378. doi: 10.7717/peerj.11378.
  16. Moore, J.F., Udell, B.J., Martin, J., Turinkunkiko, E., and Masozera, M.K. 2021. Optimal allocation of law enforcement patrol effort to mitigate poaching activities.  Ecological Applications. 31(5). doi: 10.1002/eap.2337.
  17. Moore, J.F., Pine W.E., Frederick, P.C., Beck, S., Moreno, M., Dodrill M.J., Boone, M., Sturmer, L., and Yurek, S. 2020. Trends in oyster populations in the northeastern Gulf of Mexico: An assessment of river discharge and fishing effects over time and space. Marine and Coastal Fisheries. doi: 10.1002/mcf2.10117. 
  18. Dobson, A.D.M., Aebischer, N., Beale, C., Brozovic, R., Coals, P., Critchlow, R., Dancer, A., Greve, M., Hinsley, A., Ibbett, H., Johnston, A., Kuiper, T., Le Comber, S., Mahood, S., Milner-Gulland, E.J. Moore, J.F., Nilsen, E.B., Pocock, M., Quinn, A., Travers, H., Wildfred, P, Wright, J., and Keane, A. 2020. Making messy data work for conservation. One Earth. 2(5), 455-465.
  19. Moore, J.F., Pine, W.E., Mulindahabi, F., Niyigaba, P., Gatorano, G., Masozera, M.K., and Beaudrot, L. 2020. Comparison of mammalian species richness and detection probability between line transects, ground cameras, and arboreal cameras. Animal Conservation. 23(5). doi: 10.1111/acv.12569.
  20. O’Brien, T.G., Ahumada, J., Akampurla, E., Beaudrot, L., Boekee, K., Brncic, T., Hickey, J., Jansen, P.A., Kayijamahe, C., Moore, J.F., Mugerwa, B., Mulindahabi, F., Ndoundou-Hockemba, M., Niyigaga, P., Nyiratuza, M., Rovero, F., and Uzabaho, E. 2019. Camera trapping reveals trends in forest duiker populations in African National Parks. Remote Sensing in Ecology and Conservation. doi: 10.1002/rse2.132.
  21. Everatt, K., Moore, J.F., and Kerley, G. 2019. Africa's apex predator, the lion, is limited by interference and exploitative competition with humans. Global Ecology and Conservation. doi: 10.1016/j.gecco.2019.e00758.
  22. Moore, J.F., Hines, J.E., Mulindahabi, F., and Masozera, M.K. 2019. Factors affecting species richness and distribution spatially and temporally within a protected area using multi-season occupancy models. Animal Conservation, doi: 10.1111/acv.12491.
  23. Moore, J.F., Mulindahabi, F., Masozera, M.K., Nichols, J.D., Hines, J.E., Turikunkiko, E., and Oli, M.K. 2018. Are ranger patrols effective in reducing poaching-related threats in protected areas? Journal of Applied Ecology, doi: 10.1111/135-2664.12965.
  24. Moore, J.F., Mulindahabi, F., Gatorne, G, Niyigaba, P., Ndikubwmana, I., Cipolletta, C., and Masozera, M.K. 2018. Shifting through the forest: home range, movement patterns and diet of the eastern chimpanzee (Pan troglodytes schweinfurthii) in Nyungwe National Park, Rwanda. American Journal of Primatology, doi: 10.1001/ajp.22897.
  25. Moore, J.F., Wells, C.P., Van Vuren, D.H., and Oli, M.K. 2016. Who pays? Intra- versus Inter- Generational Costs of Reproduction. Ecosphere 7(2):e01236.
  26. McGrady, M.J., Hines, J.E., Rollie, C.J., Smith, G.D., Morton, E.R., Moore, J.F., Mearns, R.M., Newton, I., Murillo-Garcia, O.E., and Oli, M.K. 2016. Territory occupancy and breeding success of Peregrine Falcons Falco peregrinus at various stages of population recovery. IBIS, doi: 10.1111/ibi.12443. 

Species Notes:
  1. Akampurira, E., Uzabaho, E., Bitariho, R., and Moore, J.F. 2024. First photographic evidence of the Central African Oyan in Uganda. African Journal of Ecology. doi: 10.1111/aje.13343
  2. Turikunkiko, E., Mulindahabi, F., Gatorano, G., Muvunyi, R., Ntihemuka, P., Niyigaba, P., Ndikubwimana, I., Karegire, N., and Moore, J.F. 2021. Resighting African Wildcat (Felix sylvestris): Camera trap photograph in Nyungwe National Park, Rwanda. African Journal of Ecology, doi: 10.1111/aje.12937
  3. Moore, J.F., Uzabaho, E., Kayijamahe, C., Nyiratuza, M., Ildephonse, K., and Mulindahabi, F. Autumn 2019. Photographic evidence of the African Golden Cat in Rwanda. Cat News. Number 70.
  4. Moore, J.F. and Niyigaba, P. 2018. First sighting of the African linsang or Central African oyan (Poiana richardsonii) in Rwanda. African Journal of Ecology, doi: 10.1111/aje.12576.
  5. Moore, J.F., Nyiratuza, M., Akampurira, E., and O’Brien, T.G. 2018. Distribution and description of the Lestrade’s duiker (Cephalophus weynsi lestradei) in Rwanda and Uganda. Gnusletter. Vol. 35, Issue 1.

Published Datasets:
  1. Waddle, J.H., Moore, J.F., and Martin, J. 2025. Data from “Quantifying the relative importance of survival threats to a long-lived reptile using expert elicitation.”: U.S. Geological Survey data release, https://doi.org/10.5066/P13UGSCQ
  2. Pine, William, Moore, Jennifer F., Frederick, Peter, Sturmer, Leslie, & Allen, Michael. (2021). Recovery and Resilience of Oyster Reefs in the Big Bend of Florida - Oyster transect count data [Data set]. Zenodo. https://doi.org/10.5281/zenodo.5517692
  3. Moore, J.F., Martin, J., Waddle, J.H., Grant, E.H.C., Fleming, J., Bohnett, E., Akre, T.S.B., Brown, D.J., Jones, M.T., Oxenrider, K., Tur, A., Willey, L.L., and Johnson, F.A., 2021, Data from: "Evaluating the effect of expert elicitation techniques on population status assessment in the face of large uncertainty": U.S. Geological Survey data release, https://doi.org/10.5066/P99F5J2B.
  4. Moore, J.F., Uzabaho, E., Musana, A., Uwingeli, P., Hines, J.E., and Nichols, J.D. 2021. Data from "What is the effect of poaching activity on wildlife species?" Institutional Repository at the University of Florida. https://ufdc.ufl.edu/IR00011364/00001​
  5. Udell, Bradley, Moore, Jennifer, Martin, Julien, Turikunkiko, Ezechiel, & Masozera, Michel. (2020). Optimal allocation of law enforcement patrol effort to mitigate poaching activities [Data set]. https://doi.org/10.5061/dryad.4xgxd2583
  6. Moore, J.F., Mulindahabi, F., Masozera, M.K., Nichols, J.D., Hines, J.E., Turikunkiko, E., and Oli, M.K. 2017. Data from "Are ranger patrols effective in reducing poaching-related threats in protected areas?" Institutional Repository at the University of Florida. https://ufdc.ufl.edu/IR00009981/00001

PDF's available through research gate: https://www.researchgate.net/profile/Jennifer_Moore39

Media Articles:
https://news.mongabay.com/2021/07/arboreal-camera-traps-add-tons-of-value-to-forest-canopy-research
http://blogs.ifas.ufl.edu/news/2021/07/30/global-team-of-wildlife-researchers-furthers-study-of-elusive-tree-dwelling-animals/
https://phys.org/news/2021-04-scientists-wildlife-mobilize-poaching.html
​http://blogs.ifas.ufl.edu/news/2021/03/31/uf-scientists-help-wildlife-parks-mobilize-against-poaching/
​https://news.mongabay.com/2020/03/camera-traps-in-trees-reveal-a-richness-of-species-in-rwandan-park/
https://newsroom.wcs.org/News-Releases/articleType/ArticleView/articleId/13892/Camera-Traps-in-Trees-Thats-a-Thing-Now.aspx
​http://blogs.ifas.ufl.edu/news/2020/03/05/reaching-new-heights-setting-cameras-in-trees-gives-glimpse-at-rare-african-species/
​https://appliedecologistsblog.com/2017/08/22/poaching-problems/
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